NUCLEIC ACID SEQUENCE MANIPULATIONS
Programs
CONCENTRATION calculates the
concentration of nucleic acids in a stock solution based on user-input values of sample type, OD260, OD280, and dilution of sample examined.
INCHWORM estimates length or mass from
electrophoretic mobility.
EXTRACTION Extract a
subsequence from a DNA sequence. User may also extract and join exons from genomic sequence.
NT TRANSLATION Translate nucleic
acid sequence to amino acid sequence.
AA TRANSLATION Translate amino
acid sequence to nucleic acid sequence.
GENE FINDER identifies open reading frames
in genomic DNA sequences.
DIGESTION identifies
cleavage sites and fragments generated by restriction endonuclease digestion of a DNA sequence.
ASSEMBLER Aligns overlapping sequencing
"reads" and assembles a consensus sequence.
MUT'n'CUT Identifies single-nucleotide
mutations giving rise to unique restriction endonuclease recognition sites.
This site is under construction.
last update: 16/10/01
Comments or suggestions?
Constructive criticism, the URLs of related links, and suggestions for programs are
welcome.
